BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030G07SP1|AL429279
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig476 364 e-100
3x_Contig309 348 1e-95
>3x_Contig476
Length = 2410
Score = 364 bits (183), Expect = e-100
Identities = 207/215 (96%)
Strand = Plus / Plus
Query: 1 gattgaaaattaaatcttaaaacttggtattaaacgaacttagaaggttggatattaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2196 gattgaaaattaaatcttaaaacttggtattaaacgaacttagaaggttggatattaatt 2255
Query: 61 attacttctttgatcccccaacaagtcttgtgaaagtgtatttgttttctttgaactatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2256 attacttctttgatcccccaacaagtcttgtgaaagtgtatttgttttctttgaactatt 2315
Query: 121 tccttttcaatatgaatattgatcttgattgattgcaaaagctaagaacgcaaaacaacc 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 2316 tccttttcaatatgaatattgatcttgattgattgaaaaagctaagaacgcaaaaaaaaa 2375
Query: 181 ttaaatgatgattgcattgaacaacatcgaaactt 215
|||||||||||||| |||||| || || |||||||
Sbjct: 2376 ttaaatgatgattgaattgaaaaaaatagaaactt 2410
>3x_Contig309
Length = 1848
Score = 348 bits (175), Expect = 1e-95
Identities = 180/183 (98%)
Strand = Plus / Minus
Query: 700 gtaaagacggttagggataaggctggacactatggatgagtaaggtttttgcatgttgta 759
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1848 gtaaagacggttagggataaggctggacactatggatgagtaaggtttttgcattttgta 1789
Query: 760 ctacagtttccgaaatcgaatgawagagcagattaaagttgcgatatttgatagatgaaa 819
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1788 ctacagtttccgaaatcgaatgaaagagcagattaaagttgcgatatttgatagatgaaa 1729
Query: 820 aaagagggattgattggcattatggaaagcttaggatagaggagatgagatgaatgtkag 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1728 aaagagggattgattggcattatggaaagcttaggatagaggagatgagatgaatgtgag 1669
Query: 880 ggt 882
|||
Sbjct: 1668 ggt 1666
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8663
Number of Sequences: 1807
Number of extensions: 8663
Number of successful extensions: 88
Number of sequences better than 1.0e-20: 2
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)